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Graduate course list
- LMP1001/1002/1003: Graduate Seminars in Laboratory Medicine and Pathobiology
- LMP1005H: Fundamentals of Research Practice
- LMP1100H: Cellular imaging in pathobiology
- LMP1101H: Basic concepts in inflammatory/autoimmune arthritis
- LMP1102H: Clinical concepts in inflammatory/autoimmune arthritis
- LMP1103H: Tissue injury, repair and regeneration
- LMP1105: Current understanding of Atherosclerosis
- LMP1106H: Molecular Biology Techniques
- LMP1107H: Bioinformatics in LMP
- LMP1108H: Genome analysis in medicine
- LMP1110H: Neural Stem Cells - brain development and maintenance
- LMP1111: Introduction to R and the Analysis of Single Cell Data
- LMP1200H: Neoplasia
- LMP1203H: Basic principles of analytical clinical biochemistry
- LMP1206H: Next generation genomics in clinical medicine
- LMP1207H: Mass spectrometry, proteomics and their clinical applications
- LMP1208H: Molecular clinical microbiology and infectious diseases
- LMP1210H - Basic Principles of Machine Learning in Biomedical Research
- LMP1211H: Foundations in Musculoskeletal Science
- LMP2004H: Introduction to Biostatistics
- Fees, stipends, awards & grants
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- LMP Workshop Program
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- Program completion for MSc and PhD
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- Student services and support
- Communicate your research: the 3MT in LMP
- Mentoring & professional development for graduate students
- Master of Health Science (MHSc) in Laboratory Medicine
- Master of Science in Applied Computing (MScAC) Artificial Intelligence in Healthcare
- Collaborative Specialization in Musculoskeletal Sciences (CSMS)
- Master of Health Science (MHSc) in Translational Research
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- LMP1210H - Basic Principles of Machine Learning in Biomedical Research
LMP1210H: Basic Principles of Machine Learning in Biomedical Research
Who can attend
You must be registered in a graduate program to attend this course.
This course is open to all graduate students at the University of Toronto, provided you have pre-approval from your department and the course coordinators.
Course description
This course is intended for graduate students in Health Sciences to learn the basic principles of machine learning in biomedical research and to build and strengthen their computational skills of medical research.
The course aims to equip you with the fundamental knowledge of machine learning (ML).
During the course, you will acquire basic computational skills and hands-on experience to deploy ML algorithms using python. Students are expected to be familiar in python prior to taking this course.
You will learn the current practices and applications of ML in medicine and understand what ML can and cannot do for medicine. The goal of this course to establish an essential foundation for graduate students to take the first steps in computational research in medicine.
Communication
Students are encouraged to sign up to Piazza to join course discussions. If your question is about the course material and doesn’t give away any hints for the homework, please post to Piazza so that the entire class can benefit from the answer.
Please do not send the instructor or the TAs email about the class directly to their personal accounts. Use private messages on Piazza instead.
Course coordinators
lmp.grad@utoronto.ca for administrative queries.
Teaching Assistant (TA)
Ahmedreza Attarpour
Timings and location
Thursdays, 10:30 am - 12:30 pm
Location: BA1210 (Bahen Centre Information Tech)
Evaluation methods
- Three assignments (45%)
- A1 – 15%, Due Feb 1
- A2 – 15%, Due Feb 15
- A3 – 15%, Due Mar 7
- Term project on machine learning algorithms in medicine (55%) - Proposal due Feb 20 and final report due April 8
Schedule
Date |
Topic |
---|---|
January 9, 2025 |
Intro to ML in medicine, KNN |
January 16, 2025 |
Tree based classifiers A1 released |
January 23, 2025 |
Linear methods for classification and regression |
January 30, 2025 |
Neural networks A1 due, A2 released |
February 6, 2025 |
Ensemble models |
February 13, 2025 |
Unsupervised learning A2 due, A3 released |
February 20, 2025 |
Reading week (no class) |
February 27, 2025 |
Unsupervised learning |
March 6, 2025 |
Guest lecture A3 due |
March 13, 2025 |
Medical imaging |
March 20, 2025 |
Office hours for project |
March 27, 2025 |
Team presentation |
April 3, 2025 |
Team presentation Project report due |